This code is inspired by Cache-friendly, Parallel, and Samplesort-based Constructor for Suffix Arrays and LCP Arrays. We copied many ideas from the original C++ implementation CaPS-SA, most notably ...

Suffix trees are fundamental data structures in stringology and have wide applications across various domains. In this work, we propose two linear-time algorithms for indexing strings under each ...

Suffix arrays serve as a fundamental tool in string processing by indexing all suffixes of a text in lexicographical order, thereby facilitating fast pattern searches, text retrieval, and genome ...

Abstract: Existing time series variable-length motif mining algorithms based on suffix arrays suffer from long running times and are prone to premature termination of matching due to variations in ...

State-of-the-art antenna design and optimization (D/O) is increasingly being done using Global Search and Optimization (GSO) algorithms such as Ant Colony Optimization (ACO), Particle Swarm ...

Abstract: Massive amount of genomics data are being produced nowadays by Next Generation Sequencing machines. The suffix array is currently the best choice for indexing genomics data, because of its ...

In the field of genome assembly, contig assembly is one of the most important parts. Contig assembly requires the processing of overlapping regions of a large number of DNA sequences and this ...

Add a description, image, and links to the parallel-suffix-array topic page so that developers can more easily learn about it.

remove-circle Internet Archive's in-browser video "theater" requires JavaScript to be enabled. It appears your browser does not have it turned on. Please see your ...

When William Legrand finally decrypted the string, it did not seem to make much more sense than it did before. The suffix tree is the core data structure in string analysis. It has a rich history, ...