Multiple sequence alignment (MSA) is a cornerstone of computational biology, facilitating the exploration of functional, structural and evolutionary relationships among biological sequences.

Abstract: Sequence alignment is one of the core activities of bioinformatics by which scientists can compare DNA, RNA, or protein sequences to determine similarities and differences. Sequence ...

Abstract: This paper presents a DNA Sequence Alignment approach that explores all potential optimal solutions for aligning pairwise DNA sequences. The suggested DNA sequence alignment technique ...

i-Motifs (iMs) are cytosine-rich, four-stranded DNA structures with emerging roles in gene regulation and genome stability. Despite their biological relevance, genome-wide prediction of iM-forming ...

ABSTRACT: This study evaluated the molecular characterization of different ecotypes of B. aegyptiaca populations in the four sites: Koily alpha, Labgar, Ranérou and Ballou according to the environment ...

Sequence alignments are often used to analyze genomic data. However, such alignments are often only calculated and compared on small sequence intervals for analysis purposes. When comparing longer ...

We present the Scalable Nucleotide Alignment Program (SNAP), a new short and long read aligner that is both more ac- curate (i.e., aligns more reads with fewer errors) and 10–100× faster than state-of ...

>Construct library for human genome. Break whole genome sequence into **11** bases length words overlappedly (**respectively for each chromosome**), every word as a name of a txt file which contain ...